OCMS_16S dada2 documentation

Contents:

• ocms_16s dada2 - amplicon sequencing analysis
  • Purpose
  • Installation
  • Running the pipeline
• Acknowledgements
• Tutorial: Using OCMS_16S to process amplicon sequencing data
  • Step 1: Download tutorial data
  • Step 2: Rename files
  • Step 3: Create and edit configuration file
  • Step 4: Run the pipeline
  • Step 5: Build the report
  • Step 6: Downstream analysis with OCMSlooksy

Indices and tables

• Index

• Module Index

• Search Page